Left reads: Input : 1116014 Mapped : 961515 (86.2% of input) of these: 165675 (17.2%) have multiple alignments (41913 have >20) Right reads: Input : 1116014 Mapped : 900211 (80.7% of input) of these: 156638 (17.4%) have multiple alignments (41917 have >20) 83.4% overall read mapping rate. Aligned pairs: 802395 of these: 140073 (17.5%) have multiple alignments 18431 ( 2.3%) are discordant alignments 70.2% concordant pair alignment rate.