Left reads: Input : 1185873 Mapped : 1016585 (85.7% of input) of these: 153231 (15.1%) have multiple alignments (18819 have >20) Right reads: Input : 1185873 Mapped : 993921 (83.8% of input) of these: 151339 (15.2%) have multiple alignments (18819 have >20) 84.8% overall read mapping rate. Aligned pairs: 906290 of these: 138986 (15.3%) have multiple alignments 16682 ( 1.8%) are discordant alignments 75.0% concordant pair alignment rate.