Left reads: Input : 1483720 Mapped : 1321031 (89.0% of input) of these: 165699 (12.5%) have multiple alignments (33155 have >20) Right reads: Input : 1483720 Mapped : 1264451 (85.2% of input) of these: 162109 (12.8%) have multiple alignments (33155 have >20) 87.1% overall read mapping rate. Aligned pairs: 1159359 of these: 148351 (12.8%) have multiple alignments 26629 ( 2.3%) are discordant alignments 76.3% concordant pair alignment rate.