Left reads: Input : 479373 Mapped : 381076 (79.5% of input) of these: 50108 (13.1%) have multiple alignments (7602 have >20) Right reads: Input : 479373 Mapped : 427078 (89.1% of input) of these: 55381 (13.0%) have multiple alignments (7602 have >20) 84.3% overall read mapping rate. Aligned pairs: 347927 of these: 46626 (13.4%) have multiple alignments 8409 ( 2.4%) are discordant alignments 70.8% concordant pair alignment rate.