Left reads: Input : 480225 Mapped : 414988 (86.4% of input) of these: 106057 (25.6%) have multiple alignments (23329 have >20) Right reads: Input : 480225 Mapped : 411355 (85.7% of input) of these: 106047 (25.8%) have multiple alignments (23362 have >20) 86.0% overall read mapping rate. Aligned pairs: 365646 of these: 95536 (26.1%) have multiple alignments 9342 ( 2.6%) are discordant alignments 74.2% concordant pair alignment rate.