Left reads: Input : 1087722 Mapped : 947430 (87.1% of input) of these: 110822 (11.7%) have multiple alignments (16970 have >20) Right reads: Input : 1087722 Mapped : 912394 (83.9% of input) of these: 108716 (11.9%) have multiple alignments (16970 have >20) 85.5% overall read mapping rate. Aligned pairs: 823606 of these: 99401 (12.1%) have multiple alignments 15246 ( 1.9%) are discordant alignments 74.3% concordant pair alignment rate.