Left reads: Input : 712221 Mapped : 608439 (85.4% of input) of these: 63164 (10.4%) have multiple alignments (13950 have >20) Right reads: Input : 712221 Mapped : 616898 (86.6% of input) of these: 64336 (10.4%) have multiple alignments (13950 have >20) 86.0% overall read mapping rate. Aligned pairs: 551979 of these: 57641 (10.4%) have multiple alignments 13633 ( 2.5%) are discordant alignments 75.6% concordant pair alignment rate.