Left reads: Input : 1712030 Mapped : 1543188 (90.1% of input) of these: 151763 ( 9.8%) have multiple alignments (13807 have >20) Right reads: Input : 1712030 Mapped : 1472348 (86.0% of input) of these: 147947 (10.0%) have multiple alignments (13807 have >20) 88.1% overall read mapping rate. Aligned pairs: 1363228 of these: 138439 (10.2%) have multiple alignments 25174 ( 1.8%) are discordant alignments 78.2% concordant pair alignment rate.