Left reads: Input : 2592902 Mapped : 2292209 (88.4% of input) of these: 839121 (36.6%) have multiple alignments (191703 have >20) Right reads: Input : 2592902 Mapped : 2256473 (87.0% of input) of these: 828739 (36.7%) have multiple alignments (191229 have >20) 87.7% overall read mapping rate. Aligned pairs: 2059323 of these: 761692 (37.0%) have multiple alignments 46498 ( 2.3%) are discordant alignments 77.6% concordant pair alignment rate.