Left reads: Input : 455727 Mapped : 362288 (79.5% of input) of these: 44829 (12.4%) have multiple alignments (6804 have >20) Right reads: Input : 455727 Mapped : 301877 (66.2% of input) of these: 37400 (12.4%) have multiple alignments (6804 have >20) 72.9% overall read mapping rate. Aligned pairs: 251720 of these: 31723 (12.6%) have multiple alignments 5244 ( 2.1%) are discordant alignments 54.1% concordant pair alignment rate.