Left reads: Input : 2622962 Mapped : 2197285 (83.8% of input) of these: 899994 (41.0%) have multiple alignments (266096 have >20) Right reads: Input : 2622962 Mapped : 2316059 (88.3% of input) of these: 948767 (41.0%) have multiple alignments (267136 have >20) 86.0% overall read mapping rate. Aligned pairs: 1997019 of these: 818355 (41.0%) have multiple alignments 79752 ( 4.0%) are discordant alignments 73.1% concordant pair alignment rate.