Left reads: Input : 885319 Mapped : 758061 (85.6% of input) of these: 18886 ( 2.5%) have multiple alignments (1399 have >20) Right reads: Input : 885319 Mapped : 734390 (83.0% of input) of these: 18415 ( 2.5%) have multiple alignments (1399 have >20) 84.3% overall read mapping rate. Aligned pairs: 667847 of these: 17045 ( 2.6%) have multiple alignments 9432 ( 1.4%) are discordant alignments 74.4% concordant pair alignment rate.