Left reads:
          Input     :   1368479
           Mapped   :   1221688 (89.3% of input)
            of these:    121424 ( 9.9%) have multiple alignments (23243 have >20)
Right reads:
          Input     :   1368479
           Mapped   :   1193142 (87.2% of input)
            of these:    120595 (10.1%) have multiple alignments (23242 have >20)
88.2% overall read mapping rate.

Aligned pairs:   1094768
     of these:    110466 (10.1%) have multiple alignments
                   22568 ( 2.1%) are discordant alignments
78.3% concordant pair alignment rate.