Left reads: Input : 1053868 Mapped : 864540 (82.0% of input) of these: 32970 ( 3.8%) have multiple alignments (4784 have >20) Right reads: Input : 1053868 Mapped : 855260 (81.2% of input) of these: 32776 ( 3.8%) have multiple alignments (4784 have >20) 81.6% overall read mapping rate. Aligned pairs: 759145 of these: 29304 ( 3.9%) have multiple alignments 17917 ( 2.4%) are discordant alignments 70.3% concordant pair alignment rate.