Left reads: Input : 213214 Mapped : 161405 (75.7% of input) of these: 14020 ( 8.7%) have multiple alignments (2305 have >20) Right reads: Input : 213214 Mapped : 144778 (67.9% of input) of these: 12485 ( 8.6%) have multiple alignments (2305 have >20) 71.8% overall read mapping rate. Aligned pairs: 116229 of these: 10274 ( 8.8%) have multiple alignments 2762 ( 2.4%) are discordant alignments 53.2% concordant pair alignment rate.