Left reads: Input : 1232350 Mapped : 1034029 (83.9% of input) of these: 79988 ( 7.7%) have multiple alignments (9072 have >20) Right reads: Input : 1232350 Mapped : 1041599 (84.5% of input) of these: 81051 ( 7.8%) have multiple alignments (9072 have >20) 84.2% overall read mapping rate. Aligned pairs: 899859 of these: 71614 ( 8.0%) have multiple alignments 25409 ( 2.8%) are discordant alignments 71.0% concordant pair alignment rate.