Left reads: Input : 390213 Mapped : 331560 (85.0% of input) of these: 11723 ( 3.5%) have multiple alignments (107 have >20) Right reads: Input : 390213 Mapped : 313468 (80.3% of input) of these: 11371 ( 3.6%) have multiple alignments (107 have >20) 82.7% overall read mapping rate. Aligned pairs: 279857 of these: 10070 ( 3.6%) have multiple alignments 5123 ( 1.8%) are discordant alignments 70.4% concordant pair alignment rate.