Left reads: Input : 786284 Mapped : 707321 (90.0% of input) of these: 129800 (18.4%) have multiple alignments (19487 have >20) Right reads: Input : 786284 Mapped : 679874 (86.5% of input) of these: 126861 (18.7%) have multiple alignments (19472 have >20) 88.2% overall read mapping rate. Aligned pairs: 625913 of these: 116842 (18.7%) have multiple alignments 13481 ( 2.2%) are discordant alignments 77.9% concordant pair alignment rate.