Left reads: Input : 962444 Mapped : 830821 (86.3% of input) of these: 96439 (11.6%) have multiple alignments (17314 have >20) Right reads: Input : 962444 Mapped : 799445 (83.1% of input) of these: 94199 (11.8%) have multiple alignments (17315 have >20) 84.7% overall read mapping rate. Aligned pairs: 722705 of these: 86111 (11.9%) have multiple alignments 12423 ( 1.7%) are discordant alignments 73.8% concordant pair alignment rate.