Left reads: Input : 358486 Mapped : 304146 (84.8% of input) of these: 15714 ( 5.2%) have multiple alignments (524 have >20) Right reads: Input : 358486 Mapped : 287145 (80.1% of input) of these: 14947 ( 5.2%) have multiple alignments (524 have >20) 82.5% overall read mapping rate. Aligned pairs: 255043 of these: 13307 ( 5.2%) have multiple alignments 6409 ( 2.5%) are discordant alignments 69.4% concordant pair alignment rate.