Left reads: Input : 228350 Mapped : 193312 (84.7% of input) of these: 6322 ( 3.3%) have multiple alignments (600 have >20) Right reads: Input : 228350 Mapped : 184809 (80.9% of input) of these: 5955 ( 3.2%) have multiple alignments (600 have >20) 82.8% overall read mapping rate. Aligned pairs: 164738 of these: 5336 ( 3.2%) have multiple alignments 3612 ( 2.2%) are discordant alignments 70.6% concordant pair alignment rate.