Left reads: Input : 377970 Mapped : 297874 (78.8% of input) of these: 15409 ( 5.2%) have multiple alignments (718 have >20) Right reads: Input : 377970 Mapped : 287628 (76.1% of input) of these: 14551 ( 5.1%) have multiple alignments (718 have >20) 77.5% overall read mapping rate. Aligned pairs: 237389 of these: 12019 ( 5.1%) have multiple alignments 4618 ( 1.9%) are discordant alignments 61.6% concordant pair alignment rate.