Left reads: Input : 478980 Mapped : 421456 (88.0% of input) of these: 20886 ( 5.0%) have multiple alignments (2113 have >20) Right reads: Input : 478980 Mapped : 416205 (86.9% of input) of these: 20607 ( 5.0%) have multiple alignments (2113 have >20) 87.4% overall read mapping rate. Aligned pairs: 378421 of these: 18674 ( 4.9%) have multiple alignments 8511 ( 2.2%) are discordant alignments 77.2% concordant pair alignment rate.