Left reads: Input : 1551808 Mapped : 1402455 (90.4% of input) of these: 141995 (10.1%) have multiple alignments (19647 have >20) Right reads: Input : 1551808 Mapped : 1334902 (86.0% of input) of these: 138106 (10.3%) have multiple alignments (19647 have >20) 88.2% overall read mapping rate. Aligned pairs: 1236252 of these: 127883 (10.3%) have multiple alignments 24557 ( 2.0%) are discordant alignments 78.1% concordant pair alignment rate.