Left reads: Input : 931119 Mapped : 761584 (81.8% of input) of these: 103351 (13.6%) have multiple alignments (9331 have >20) Right reads: Input : 931119 Mapped : 763895 (82.0% of input) of these: 104458 (13.7%) have multiple alignments (9331 have >20) 81.9% overall read mapping rate. Aligned pairs: 689426 of these: 94773 (13.7%) have multiple alignments 11017 ( 1.6%) are discordant alignments 72.9% concordant pair alignment rate.