Left reads: Input : 1001586 Mapped : 870957 (87.0% of input) of these: 27802 ( 3.2%) have multiple alignments (4024 have >20) Right reads: Input : 1001586 Mapped : 845282 (84.4% of input) of these: 27221 ( 3.2%) have multiple alignments (4024 have >20) 85.7% overall read mapping rate. Aligned pairs: 775176 of these: 25206 ( 3.3%) have multiple alignments 11703 ( 1.5%) are discordant alignments 76.2% concordant pair alignment rate.