Left reads: Input : 1267361 Mapped : 1132064 (89.3% of input) of these: 90505 ( 8.0%) have multiple alignments (8773 have >20) Right reads: Input : 1267361 Mapped : 1105538 (87.2% of input) of these: 89800 ( 8.1%) have multiple alignments (8776 have >20) 88.3% overall read mapping rate. Aligned pairs: 1018453 of these: 82901 ( 8.1%) have multiple alignments 18105 ( 1.8%) are discordant alignments 78.9% concordant pair alignment rate.