Left reads: Input : 892439 Mapped : 728112 (81.6% of input) of these: 156456 (21.5%) have multiple alignments (29683 have >20) Right reads: Input : 892439 Mapped : 718964 (80.6% of input) of these: 155997 (21.7%) have multiple alignments (29698 have >20) 81.1% overall read mapping rate. Aligned pairs: 640906 of these: 139657 (21.8%) have multiple alignments 12281 ( 1.9%) are discordant alignments 70.4% concordant pair alignment rate.