Left reads: Input : 1365324 Mapped : 1161523 (85.1% of input) of these: 175262 (15.1%) have multiple alignments (18353 have >20) Right reads: Input : 1365324 Mapped : 1143436 (83.7% of input) of these: 174130 (15.2%) have multiple alignments (18353 have >20) 84.4% overall read mapping rate. Aligned pairs: 1047887 of these: 160890 (15.4%) have multiple alignments 16919 ( 1.6%) are discordant alignments 75.5% concordant pair alignment rate.