Left reads: Input : 2855860 Mapped : 2488949 (87.2% of input) of these: 100810 ( 4.1%) have multiple alignments (11707 have >20) Right reads: Input : 2855860 Mapped : 2449035 (85.8% of input) of these: 99613 ( 4.1%) have multiple alignments (11703 have >20) 86.5% overall read mapping rate. Aligned pairs: 2284191 of these: 92570 ( 4.1%) have multiple alignments 26451 ( 1.2%) are discordant alignments 79.1% concordant pair alignment rate.