Left reads: Input : 946206 Mapped : 767030 (81.1% of input) of these: 201713 (26.3%) have multiple alignments (32399 have >20) Right reads: Input : 946206 Mapped : 752415 (79.5% of input) of these: 199139 (26.5%) have multiple alignments (32399 have >20) 80.3% overall read mapping rate. Aligned pairs: 655985 of these: 177030 (27.0%) have multiple alignments 14722 ( 2.2%) are discordant alignments 67.8% concordant pair alignment rate.