Left reads: Input : 445701 Mapped : 374109 (83.9% of input) of these: 9549 ( 2.6%) have multiple alignments (765 have >20) Right reads: Input : 445701 Mapped : 361787 (81.2% of input) of these: 9247 ( 2.6%) have multiple alignments (765 have >20) 82.6% overall read mapping rate. Aligned pairs: 318779 of these: 8127 ( 2.5%) have multiple alignments 5645 ( 1.8%) are discordant alignments 70.3% concordant pair alignment rate.