Left reads: Input : 960928 Mapped : 836733 (87.1% of input) of these: 61465 ( 7.3%) have multiple alignments (6382 have >20) Right reads: Input : 960928 Mapped : 814318 (84.7% of input) of these: 60425 ( 7.4%) have multiple alignments (6382 have >20) 85.9% overall read mapping rate. Aligned pairs: 733775 of these: 55210 ( 7.5%) have multiple alignments 15642 ( 2.1%) are discordant alignments 74.7% concordant pair alignment rate.