Left reads: Input : 706040 Mapped : 600259 (85.0% of input) of these: 17987 ( 3.0%) have multiple alignments (517 have >20) Right reads: Input : 706040 Mapped : 579070 (82.0% of input) of these: 17570 ( 3.0%) have multiple alignments (517 have >20) 83.5% overall read mapping rate. Aligned pairs: 511901 of these: 15427 ( 3.0%) have multiple alignments 9403 ( 1.8%) are discordant alignments 71.2% concordant pair alignment rate.