Left reads: Input : 892475 Mapped : 749848 (84.0% of input) of these: 17154 ( 2.3%) have multiple alignments (1906 have >20) Right reads: Input : 892475 Mapped : 739885 (82.9% of input) of these: 16943 ( 2.3%) have multiple alignments (1906 have >20) 83.5% overall read mapping rate. Aligned pairs: 680760 of these: 15698 ( 2.3%) have multiple alignments 9719 ( 1.4%) are discordant alignments 75.2% concordant pair alignment rate.