Left reads: Input : 761446 Mapped : 672948 (88.4% of input) of these: 197485 (29.3%) have multiple alignments (46950 have >20) Right reads: Input : 761446 Mapped : 653917 (85.9% of input) of these: 193507 (29.6%) have multiple alignments (46856 have >20) 87.1% overall read mapping rate. Aligned pairs: 589548 of these: 175726 (29.8%) have multiple alignments 17255 ( 2.9%) are discordant alignments 75.2% concordant pair alignment rate.