Left reads: Input : 886112 Mapped : 776683 (87.7% of input) of these: 75725 ( 9.7%) have multiple alignments (9888 have >20) Right reads: Input : 886112 Mapped : 756813 (85.4% of input) of these: 74723 ( 9.9%) have multiple alignments (9892 have >20) 86.5% overall read mapping rate. Aligned pairs: 687100 of these: 68852 (10.0%) have multiple alignments 13146 ( 1.9%) are discordant alignments 76.1% concordant pair alignment rate.