Left reads: Input : 1157804 Mapped : 1002799 (86.6% of input) of these: 186703 (18.6%) have multiple alignments (30678 have >20) Right reads: Input : 1157804 Mapped : 974796 (84.2% of input) of these: 183504 (18.8%) have multiple alignments (30678 have >20) 85.4% overall read mapping rate. Aligned pairs: 886947 of these: 167458 (18.9%) have multiple alignments 21091 ( 2.4%) are discordant alignments 74.8% concordant pair alignment rate.