Left reads: Input : 180316 Mapped : 142204 (78.9% of input) of these: 2827 ( 2.0%) have multiple alignments (265 have >20) Right reads: Input : 180316 Mapped : 143228 (79.4% of input) of these: 2845 ( 2.0%) have multiple alignments (265 have >20) 79.1% overall read mapping rate. Aligned pairs: 120626 of these: 2368 ( 2.0%) have multiple alignments 2309 ( 1.9%) are discordant alignments 65.6% concordant pair alignment rate.