Left reads: Input : 600262 Mapped : 530317 (88.3% of input) of these: 130206 (24.6%) have multiple alignments (32784 have >20) Right reads: Input : 600262 Mapped : 531322 (88.5% of input) of these: 131797 (24.8%) have multiple alignments (33026 have >20) 88.4% overall read mapping rate. Aligned pairs: 489466 of these: 120029 (24.5%) have multiple alignments 8177 ( 1.7%) are discordant alignments 80.2% concordant pair alignment rate.