Left reads: Input : 959279 Mapped : 817475 (85.2% of input) of these: 412649 (50.5%) have multiple alignments (107536 have >20) Right reads: Input : 959279 Mapped : 806600 (84.1% of input) of these: 407742 (50.6%) have multiple alignments (107065 have >20) 84.7% overall read mapping rate. Aligned pairs: 735425 of these: 375914 (51.1%) have multiple alignments 16299 ( 2.2%) are discordant alignments 75.0% concordant pair alignment rate.