Left reads: Input : 674459 Mapped : 600687 (89.1% of input) of these: 91645 (15.3%) have multiple alignments (17360 have >20) Right reads: Input : 674459 Mapped : 584877 (86.7% of input) of these: 90509 (15.5%) have multiple alignments (17360 have >20) 87.9% overall read mapping rate. Aligned pairs: 533659 of these: 82419 (15.4%) have multiple alignments 11221 ( 2.1%) are discordant alignments 77.5% concordant pair alignment rate.