Left reads:
          Input     :   1241806
           Mapped   :   1111650 (89.5% of input)
            of these:    348626 (31.4%) have multiple alignments (68395 have >20)
Right reads:
          Input     :   1241806
           Mapped   :   1078106 (86.8% of input)
            of these:    340916 (31.6%) have multiple alignments (68395 have >20)
88.2% overall read mapping rate.

Aligned pairs:    988066
     of these:    313061 (31.7%) have multiple alignments
                   19382 ( 2.0%) are discordant alignments
78.0% concordant pair alignment rate.