Left reads: Input : 1384175 Mapped : 1179379 (85.2% of input) of these: 195767 (16.6%) have multiple alignments (25661 have >20) Right reads: Input : 1384175 Mapped : 1161995 (83.9% of input) of these: 194958 (16.8%) have multiple alignments (25661 have >20) 84.6% overall read mapping rate. Aligned pairs: 1055021 of these: 178019 (16.9%) have multiple alignments 19017 ( 1.8%) are discordant alignments 74.8% concordant pair alignment rate.