Left reads: Input : 953147 Mapped : 851636 (89.3% of input) of these: 61874 ( 7.3%) have multiple alignments (3045 have >20) Right reads: Input : 953147 Mapped : 817922 (85.8% of input) of these: 60357 ( 7.4%) have multiple alignments (3045 have >20) 87.6% overall read mapping rate. Aligned pairs: 754890 of these: 56698 ( 7.5%) have multiple alignments 14038 ( 1.9%) are discordant alignments 77.7% concordant pair alignment rate.