Left reads: Input : 1232837 Mapped : 1081070 (87.7% of input) of these: 217634 (20.1%) have multiple alignments (42333 have >20) Right reads: Input : 1232837 Mapped : 1061594 (86.1% of input) of these: 214698 (20.2%) have multiple alignments (42332 have >20) 86.9% overall read mapping rate. Aligned pairs: 958000 of these: 195735 (20.4%) have multiple alignments 13620 ( 1.4%) are discordant alignments 76.6% concordant pair alignment rate.