Left reads: Input : 295042 Mapped : 243370 (82.5% of input) of these: 7114 ( 2.9%) have multiple alignments (751 have >20) Right reads: Input : 295042 Mapped : 227950 (77.3% of input) of these: 6695 ( 2.9%) have multiple alignments (751 have >20) 79.9% overall read mapping rate. Aligned pairs: 196553 of these: 5690 ( 2.9%) have multiple alignments 4718 ( 2.4%) are discordant alignments 65.0% concordant pair alignment rate.