Left reads: Input : 764236 Mapped : 654758 (85.7% of input) of these: 20373 ( 3.1%) have multiple alignments (361 have >20) Right reads: Input : 764236 Mapped : 623974 (81.6% of input) of these: 19617 ( 3.1%) have multiple alignments (361 have >20) 83.7% overall read mapping rate. Aligned pairs: 559111 of these: 17489 ( 3.1%) have multiple alignments 8945 ( 1.6%) are discordant alignments 72.0% concordant pair alignment rate.