Left reads: Input : 665808 Mapped : 524808 (78.8% of input) of these: 93552 (17.8%) have multiple alignments (17707 have >20) Right reads: Input : 665808 Mapped : 507661 (76.2% of input) of these: 91095 (17.9%) have multiple alignments (17707 have >20) 77.5% overall read mapping rate. Aligned pairs: 416722 of these: 75720 (18.2%) have multiple alignments 10149 ( 2.4%) are discordant alignments 61.1% concordant pair alignment rate.