Left reads: Input : 340683 Mapped : 281863 (82.7% of input) of these: 15336 ( 5.4%) have multiple alignments (892 have >20) Right reads: Input : 340683 Mapped : 278208 (81.7% of input) of these: 15193 ( 5.5%) have multiple alignments (892 have >20) 82.2% overall read mapping rate. Aligned pairs: 240675 of these: 13178 ( 5.5%) have multiple alignments 6455 ( 2.7%) are discordant alignments 68.8% concordant pair alignment rate.